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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001159319.3 → NP_001152791.1 voltage-dependent L-type calcium channel subunit beta-1 isoform C
See identical proteins and their annotated locations for NP_001152791.1
Status: VALIDATED
- Source sequence(s)
-
AL591209
- Consensus CDS
-
CCDS48899.1
- UniProtKB/TrEMBL
-
Q6DD95
- Related
- ENSMUSP00000103187.2, ENSMUST00000107562.2
- Conserved Domains (3) summary
-
- cd12041
Location:99 → 166
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam00625
Location:228 → 408
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_001159320.2 → NP_001152792.1 voltage-dependent L-type calcium channel subunit beta-1 isoform D
See identical proteins and their annotated locations for NP_001152792.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence and in the 3' UTR and coding sequence compared to variant 5. The resulting isoform (D) has shorter and distinct N- and C-termini compared to isoform E.
- Source sequence(s)
-
AL591209
- Consensus CDS
-
CCDS48898.1
- UniProtKB/TrEMBL
- A2A542, Q3U2N3
- Related
- ENSMUSP00000103186.3, ENSMUST00000107561.9
- Conserved Domains (3) summary
-
- cd12041
Location:52 → 119
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam12052
Location:11 → 52
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl27059
Location:226 → 406
- Guanylate_kin; Guanylate kinase
-
NM_001282977.2 → NP_001269906.1 voltage-dependent L-type calcium channel subunit beta-1 isoform E
Status: VALIDATED
- Source sequence(s)
-
AL591209
- UniProtKB/TrEMBL
-
I2FKE4
- Conserved Domains (4) summary
-
- smart00072
Location:283 → 454
- GuKc; Guanylate kinase homologues
- pfam00625
Location:273 → 453
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17036
Location:99 → 166
- SH3; Src Homology 3 domain superfamily
-
NM_001282978.2 → NP_001269907.1 voltage-dependent L-type calcium channel subunit beta-1 isoform F
Status: VALIDATED
- Source sequence(s)
-
AL591209
- UniProtKB/TrEMBL
-
Q6DD95
- Conserved Domains (3) summary
-
- cd12041
Location:99 → 166
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl27059
Location:220 → 400
- Guanylate_kin; Guanylate kinase
-
NM_001430870.1 → NP_001417799.1 voltage-dependent L-type calcium channel subunit beta-1 isoform G
Status: VALIDATED
- Source sequence(s)
-
AL591209
- UniProtKB/Swiss-Prot
- A2A544, O88517, Q7TPF2, Q8R3Z5, Q8R3Z6, Q9EPT9
-
NM_001430871.1 → NP_001417800.1 voltage-dependent L-type calcium channel subunit beta-1 isoform H
Status: VALIDATED
- Source sequence(s)
-
AL591209
-
NM_031173.5 → NP_112450.1 voltage-dependent L-type calcium channel subunit beta-1 isoform A
See identical proteins and their annotated locations for NP_112450.1
Status: VALIDATED
- Source sequence(s)
-
AL591209
- Consensus CDS
-
CCDS25336.1
- UniProtKB/TrEMBL
- A2A545, Q3U2N3
- Related
- ENSMUSP00000090412.5, ENSMUST00000092736.11
- Conserved Domains (4) summary
-
- cd12041
Location:99 → 166
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- smart00072
Location:283 → 454
- GuKc; Guanylate kinase homologues
- pfam00625
Location:273 → 453
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
NM_145121.4 → NP_660099.2 voltage-dependent L-type calcium channel subunit beta-1 isoform B
Status: VALIDATED
- Source sequence(s)
-
AL591209
- Consensus CDS
-
CCDS25335.1
- UniProtKB/Swiss-Prot
- A2A544, O88517, Q7TPF2, Q8R3Z5, Q8R3Z6, Q9EPT9
- UniProtKB/TrEMBL
-
A2A543
- Related
- ENSMUSP00000017552.7, ENSMUST00000017552.13
- Conserved Domains (3) summary
-
- pfam00625
Location:228 → 408
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:58 → 99
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
- cl17036
Location:99 → 166
- SH3; Src Homology 3 domain superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
97892339..97913860 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030245499.1 → XP_030101359.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X4
- Conserved Domains (1) summary
-
- pfam00625
Location:1 → 180
- Guanylate_kin; Guanylate kinase
-
XM_036156255.1 → XP_036012148.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X3
- UniProtKB/TrEMBL
-
I2FKE4
- Conserved Domains (3) summary
-
- cd12041
Location:52 → 119
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam00625
Location:226 → 406
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:11 → 52
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
XM_030245500.2 → XP_030101360.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X4
- Conserved Domains (1) summary
-
- pfam00625
Location:1 → 180
- Guanylate_kin; Guanylate kinase
-
XM_006532092.4 → XP_006532155.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X2
- Conserved Domains (3) summary
-
- cd12041
Location:111 → 178
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam00625
Location:240 → 420
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:70 → 111
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
-
XM_006532091.4 → XP_006532154.1 voltage-dependent L-type calcium channel subunit beta-1 isoform X1
- UniProtKB/TrEMBL
-
I2FKE4
- Conserved Domains (3) summary
-
- cd12041
Location:111 → 178
- SH3_CACNB1; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta-1
- pfam00625
Location:285 → 465
- Guanylate_kin; Guanylate kinase
- pfam12052
Location:70 → 111
- VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal