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    Myct1 myc target 1 [ Mus musculus (house mouse) ]

    Gene ID: 68632, updated on 9-Dec-2024

    Summary

    Official Symbol
    Myct1provided by MGI
    Official Full Name
    myc target 1provided by MGI
    Primary source
    MGI:MGI:1915882
    See related
    Ensembl:ENSMUSG00000046916 AllianceGenome:MGI:1915882
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mtmc1; 1110020B04Rik
    Summary
    Acts upstream of or within hematopoietic stem cell homeostasis. Predicted to be located in nuclear body. Predicted to be active in nucleoplasm. Is expressed in genitourinary system. Orthologous to human MYCT1 (MYC target 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in lung adult (RPKM 13.0), heart adult (RPKM 3.6) and 13 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Myct1 in Genome Data Viewer
    Location:
    10 A1; 10 1.99 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (5543728..5556789)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (5593728..5606789)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing, nuclear envelope 1 Neighboring gene STARR-seq mESC enhancer starr_25603 Neighboring gene predicted gene, 40594 Neighboring gene STARR-seq mESC enhancer starr_25602 Neighboring gene predicted gene, 51758 Neighboring gene STARR-seq mESC enhancer starr_25600 Neighboring gene STARR-positive B cell enhancer mm9_chr10:4746082-4746383 Neighboring gene STARR-seq mESC enhancer starr_25599 Neighboring gene vasoactive intestinal polypeptide Neighboring gene predicted gene, 40595

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within hematopoietic stem cell homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myc target protein 1
    Names
    myc target in myeloid cells protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026793.2NP_081069.1  myc target protein 1

      See identical proteins and their annotated locations for NP_081069.1

      Status: VALIDATED

      Source sequence(s)
      AK054222, BB624713, BM569633
      Consensus CDS
      CCDS56681.1
      UniProtKB/Swiss-Prot
      Q3UQ11, Q8C6M8, Q8R411, Q9D182
      Related
      ENSMUSP00000050430.9, ENSMUST00000051809.10
      Conserved Domains (1) summary
      pfam15179
      Location:1187
      Myc_target_1; Myc target protein 1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      5543728..5556789
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)