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    Arsj arylsulfatase family, member J [ Rattus norvegicus (Norway rat) ]

    Gene ID: 311013, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Arsjprovided by RGD
    Official Full Name
    arylsulfatase family, member Jprovided by RGD
    Primary source
    RGD:1307640
    See related
    EnsemblRapid:ENSRNOG00000000001 AllianceGenome:RGD:1307640
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1307640
    Summary
    Predicted to enable sulfuric ester hydrolase activity. Predicted to be located in actin cytoskeleton. Orthologous to human ARSJ (arylsulfatase family member J). [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Biased expression in Lung (RPKM 22.0), Uterus (RPKM 16.8) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Arsj in Genome Data Viewer
    Location:
    2q42
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (217449147..217529142)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (214774631..214854614)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (230163014..230662084)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain-containing protein 7B-like Neighboring gene UDP glycosyltransferase 8 Neighboring gene heat shock protein 90 alpha family class B member 1, pseudogene 9 Neighboring gene uncharacterized LOC108350105 Neighboring gene uncharacterized LOC134478885 Neighboring gene histidine triad nucleotide binding protein 1, pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Sulfatases and sulfatase modifying factors: an exclusive and promiscuous relationship. Sardiello M, et al. Hum Mol Genet, 2005 Nov 1. PMID 16174644

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables sulfuric ester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in actin cytoskeleton ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    arylsulfatase J
    NP_001041352.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001047887.2 → NP_001041352.1  arylsulfatase J

      See identical proteins and their annotated locations for NP_001041352.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000002
      UniProtKB/TrEMBL
      A0A8I6GJP1, Q32KJ7
      Related
      ENSRNOP00000092332.1, ENSRNOT00000055633.4
      Conserved Domains (3) summary
      COG3119
      Location:71 → 507
      AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
      cd16029
      Location:74 → 507
      4-S; N-acetylgalactosamine 4-sulfatase, also called arylsulftase B
      cl20644
      Location:493 → 531
      DUF4976; Domain of unknown function (DUF4976)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      217449147..217529142
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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