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    ARAC9 RAC-like 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819077, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARAC9
    Official Full Name
    RAC-like 9
    Primary source
    TAIR:AT2G44690
    Locus tag
    AT2G44690
    See related
    Araport:AT2G44690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    Arabidopsis RAC-like 9; ATROP8; F16B22.18; RHO-RELATED PROTEIN FROM PLANTS 8; ROP8
    Summary
    A member of ROP GTPase gene family.
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    Genomic context

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    See ARAC9 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (18429121..18430882)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene senescence-associated family protein (DUF581) Neighboring gene casein kinase II beta subunit 4 Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant Rho GTPase signaling promotes autophagy. Lin Y, et al. Mol Plant, 2021 Jun 7. PMID 33794369
    2. A small GTPase activator protein interacts with cytoplasmic phytochromes in regulating root development. Shin DH, et al. J Biol Chem, 2010 Oct 15. PMID 20551316, Free PMC Article
    3. The role of Arabidopsis SCAR genes in ARP2-ARP3-dependent cell morphogenesis. Uhrig JF, et al. Development, 2007 Mar. PMID 17267444
    4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_130033.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagy IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in autophagosome membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RAC-like 9
    NP_566024.1
    • Arabidopsis RAC-like 9 (ARAC9); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Ras (InterPro:IPR013753), Ras small GTPase, Ras type (InterPro:IPR003577), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 3 (TAIR:AT4G35020.3); Has 24763 Blast hits to 24736 proteins in 683 species: Archae - 8; Bacteria - 73; Metazoa - 12794; Fungi - 3855; Plants - 2697; Viruses - 20; Other Eukaryotes - 5316 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18429121..18430882
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130033.3 → NP_566024.1  RAC-like 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566024.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80508, Q9XGU0
      UniProtKB/TrEMBL
      A0A178VUK9, A0A384LBU4, A0A5S9X730, Q1ECR0
      Conserved Domains (1) summary
      cd04133
      Location:18 → 190
      Rop_like; Rho-related protein from plants (Rop)-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9XGU0.1

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