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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_053104.1 RefSeqGene
- Range
-
5001..32561
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001040202.2 → NP_001035292.1 progestin and adipoQ receptor family member 3 isoform 1
See identical proteins and their annotated locations for NP_001035292.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC093841, AY424281, BX648346, DA410845
- Consensus CDS
-
CCDS34020.1
- UniProtKB/Swiss-Prot
- A8K5B7, B3KP59, Q6PIQ1, Q6TCH7, Q86X05, Q8NCP9
- UniProtKB/TrEMBL
-
F8W784
- Related
- ENSP00000421981.1, ENST00000512733.5
- Conserved Domains (1) summary
-
- pfam03006
Location:64 → 283
- HlyIII; Haemolysin-III related
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NM_001350105.2 → NP_001337034.1 progestin and adipoQ receptor family member 3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at a downstream start codon, compared to variant 1. The encoded protein (isoform 2) is shorter than isoform 1. Both variants 2 and 3 encode the same protein.
- Source sequence(s)
-
AC093841
- Conserved Domains (1) summary
-
- cl03831
Location:1 → 165
- HlyIII; Haemolysin-III related
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NM_001350106.2 → NP_001337035.1 progestin and adipoQ receptor family member 3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences, compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at a downstream start codon, compared to variant 1. The encoded protein (isoform 2) is shorter than isoform 1. Both variants 2 and 3 encode the same protein.
- Source sequence(s)
-
AC093841
- Conserved Domains (1) summary
-
- cl03831
Location:1 → 165
- HlyIII; Haemolysin-III related
RNA
-
NR_146462.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate 5' and 3' exon structure, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC093841
-
NR_146463.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate 5' and 3' exon structure, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC093841
-
NR_146464.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate 5' and 3' exon structure, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC093841
-
NR_146465.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) uses an alternate 5' and 3' exon structure, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC093841
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
78887076..78939438 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047449645.1 → XP_047305601.1 progestin and adipoQ receptor family member 3 isoform X4
-
XM_005262769.6 → XP_005262826.1 progestin and adipoQ receptor family member 3 isoform X2
See identical proteins and their annotated locations for XP_005262826.1
- UniProtKB/TrEMBL
-
F8W784
- Related
- ENSP00000344203.6, ENST00000342820.10
- Conserved Domains (1) summary
-
- cl03831
Location:64 → 264
- HlyIII; Haemolysin-III related
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XM_024453910.2 → XP_024309678.1 progestin and adipoQ receptor family member 3 isoform X3
- Conserved Domains (1) summary
-
- cl03831
Location:1 → 165
- HlyIII; Haemolysin-III related
-
XM_047449643.1 → XP_047305599.1 progestin and adipoQ receptor family member 3 isoform X1
- UniProtKB/Swiss-Prot
- A8K5B7, B3KP59, Q6PIQ1, Q6TCH7, Q86X05, Q8NCP9
- UniProtKB/TrEMBL
-
F8W784
- Related
- ENSP00000425080.1, ENST00000511594.5
RNA
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XR_938694.4 RNA Sequence
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XR_007096371.1 RNA Sequence
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XR_007096372.1 RNA Sequence
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XR_002959712.2 RNA Sequence
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XR_007096373.1 RNA Sequence
- Related
-
ENST00000515853.5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
82222838..82275056 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054348992.1 → XP_054204967.1 progestin and adipoQ receptor family member 3 isoform X4
-
XM_054348991.1 → XP_054204966.1 progestin and adipoQ receptor family member 3 isoform X3
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XM_054348990.1 → XP_054204965.1 progestin and adipoQ receptor family member 3 isoform X1
- UniProtKB/Swiss-Prot
- A8K5B7, B3KP59, Q6PIQ1, Q6TCH7, Q86X05, Q8NCP9
- UniProtKB/TrEMBL
-
F8W784
RNA
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XR_008486927.1 RNA Sequence
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XR_008486926.1 RNA Sequence
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XR_008486925.1 RNA Sequence
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XR_008486928.1 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_177453.2: Suppressed sequence
- Description
- NM_177453.2: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.