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    Galk1l1 galactokinase 1 like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 296256, updated on 27-Dec-2024

    Summary

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    Official Symbol
    Galk1l1provided by RGD
    Official Full Name
    galactokinase 1 like 1provided by RGD
    Primary source
    RGD:1565143
    See related
    AllianceGenome:RGD:1565143
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1565143; AABR07054286.1
    Summary
    Predicted to enable ATP binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 139.4), Kidney (RPKM 37.4) and 6 other tissues See more
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    Genomic context

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    See Galk1l1 in Genome Data Viewer
    Location:
    3q41
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (159805611..159844867, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (139345180..139365440, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (146298634..146347604, complement)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene S100 calcium binding protein A11, pseudogene 3 Neighboring gene uncharacterized LOC102555661 Neighboring gene uncharacterized LOC134486180 Neighboring gene galactokinase 1, pseudogene 4 Neighboring gene ribosomal protein SA, pseudogene 6 Neighboring gene cystatin F Neighboring gene adipocyte plasma membrane associated protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    sperm motility kinase X

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      159805611..159844867 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063285058.1 → XP_063141128.1  sperm motility kinase X isoform X1

    2. XM_063285054.1 → XP_063141124.1  sperm motility kinase X isoform X1

    3. XM_056985407.2 → XP_056841387.1  sperm motility kinase X isoform X1

    4. XM_063285049.1 → XP_063141119.1  sperm motility kinase X isoform X1

    5. XM_063285051.1 → XP_063141121.1  sperm motility kinase X isoform X1

    6. XM_056985393.2 → XP_056841373.1  sperm motility kinase X isoform X1

    7. XM_056985396.2 → XP_056841376.1  sperm motility kinase X isoform X1

    8. XM_063285061.1 → XP_063141131.1  sperm motility kinase X isoform X1

    9. XM_063285057.1 → XP_063141127.1  sperm motility kinase X isoform X1

    10. XM_056985402.2 → XP_056841382.1  sperm motility kinase X isoform X1

    11. XM_063285052.1 → XP_063141122.1  sperm motility kinase X isoform X1

    12. XM_063285056.1 → XP_063141126.1  sperm motility kinase X isoform X1

    13. XM_063285060.1 → XP_063141130.1  sperm motility kinase X isoform X1

    14. XM_063285053.1 → XP_063141123.1  sperm motility kinase X isoform X1

    15. XM_063285055.1 → XP_063141125.1  sperm motility kinase X isoform X1

    16. XM_056985405.2 → XP_056841385.1  sperm motility kinase X isoform X1

    17. XM_063285050.1 → XP_063141120.1  sperm motility kinase X isoform X1

    18. XM_063285070.1 → XP_063141140.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    19. XM_063285074.1 → XP_063141144.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    20. XM_063285068.1 → XP_063141138.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    21. XM_063285065.1 → XP_063141135.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    22. XM_063285071.1 → XP_063141141.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    23. XM_063285063.1 → XP_063141133.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    24. XM_063285073.1 → XP_063141143.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    25. XM_063285075.1 → XP_063141145.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    26. XM_063285066.1 → XP_063141136.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    27. XM_063285064.1 → XP_063141134.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    28. XM_063285062.1 → XP_063141132.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    29. XM_063285072.1 → XP_063141142.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    30. XM_063285067.1 → XP_063141137.1  sperm motility kinase X isoform X2

      UniProtKB/TrEMBL
      A0A0G2K2T8

    31. XM_063285059.1 → XP_063141129.1  sperm motility kinase X isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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