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    thionin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836604, updated on 18-Sep-2024

    Summary

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    Official Full Name
    thionin-like protein
    Primary source
    TAIR:AT5G64816
    Locus tag
    AT5G64816
    See related
    Araport:AT5G64816
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (25912969..25914027)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene WRKY DNA-binding protein 51 Neighboring gene Ras-related small GTP-binding family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene programmed cell death 2 C-terminal domain-containing protein Neighboring gene general control non-repressible 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001345653.1
    NM_125879.4
    NM_203265.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    thionin-like protein
    NP_568997.1
    • unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974994.1
    • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25912969..25914027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345652.1 → NP_001331704.1  thionin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8Q8
      UniProtKB/TrEMBL
      A0A178UNF2, A0A384K8L2, Q570W1

    2. NM_203265.3 → NP_974994.1  thionin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974994.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8Q8
      UniProtKB/TrEMBL
      A0A178UNF2, A0A384K8L2, Q570W1

    3. NM_125879.4 → NP_568997.1  thionin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568997.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8Q8
      UniProtKB/TrEMBL
      A0A178UNF2, A0A384K8L2, Q570W1

    4. NM_001345653.1 → NP_001331705.1  thionin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8Q8
      UniProtKB/TrEMBL
      A0A178UNF2, A0A384K8L2, Q570W1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L8Q8.1

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