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    myb-like protein X [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834918, updated on 18-Sep-2024

    Summary

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    Official Full Name
    myb-like protein X
    Primary source
    TAIR:AT5G48610
    Locus tag
    AT5G48610
    See related
    Araport:AT5G48610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K15N18.8; K15N18_8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (19711541..19716059)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosome 3 Neighboring gene Putative membrane lipoprotein Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene Cyclin family protein Neighboring gene Cyclin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis. Frerigmann H, et al. Plant Physiol, 2014 Sep. PMID 25049362, Free PMC Article
    2. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001344779.1
    NM_001344780.1
    NM_001344781.1
    NM_124237.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb-like protein X
    NP_199672.2
    • unknown protein; Has 43043 Blast hits to 23768 proteins in 1327 species: Archae - 108; Bacteria - 3952; Metazoa - 17076; Fungi - 3614; Plants - 1643; Viruses - 204; Other Eukaryotes - 16446 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19711541..19716059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344778.1 → NP_001332323.1  myb-like protein X [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHX7, Q0WVL0

    2. NM_124237.4 → NP_199672.2  myb-like protein X [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199672.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHX7, Q0WVL0

    3. NM_001344779.1 → NP_001332322.1  myb-like protein X [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGR8, A0A7G2FL58

    4. NM_001344780.1 → NP_001332321.1  myb-like protein X [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UHX7, Q0WVL0

    5. NM_001344781.1 → NP_001332320.1  myb-like protein X [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGR8, A0A7G2FL58
    Nucleotide Protein
    Heading Accession and Version

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