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    P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836397, updated on 18-Sep-2024

    Summary

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    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT5G62760
    Locus tag
    AT5G62760
    See related
    Araport:AT5G62760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQB2.8; MQB2_8
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (25204472..25209583, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SPFH/Band 7/PHB domain-containing membrane-associated protein family Neighboring gene uncharacterized protein Neighboring gene membrane-associated kinase regulator, putative (DUF1645) Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene 1-deoxy-D-xylulose 5-phosphate reductoisomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    NM_001203669.1
    NM_001345559.1
    NM_001345560.1
    NM_180919.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_001190598.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages.
    NP_001190599.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages.
    NP_568961.3
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 7233 Blast hits to 5023 proteins in 448 species: Archae - 2; Bacteria - 468; Metazoa - 2972; Fungi - 1085; Plants - 1472; Viruses - 401; Other Eukaryotes - 833 (source: NCBI BLink).
    NP_851250.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 7376 Blast hits to 5164 proteins in 470 species: Archae - 2; Bacteria - 500; Metazoa - 3049; Fungi - 1087; Plants - 1477; Viruses - 399; Other Eukaryotes - 862 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25204472..25209583 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203670.2 → NP_001190599.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190599.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654GDK5, Q9FM17
      Conserved Domains (1) summary
      pfam08433
      Location:279 → 384
      KTI12; Chromatin associated protein KTI12

    2. NM_125671.4 → NP_568961.3  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568961.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNV8, Q56XD6

    3. NM_180919.1 → NP_851250.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851250.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K7T1

    4. NM_001203669.1 → NP_001190598.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190598.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K7S9
      Conserved Domains (1) summary
      pfam13207
      Location:278 → 296
      AAA_17; AAA domain

    5. NM_001345559.1 → NP_001332400.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNV8, A0A178URL7, A0A1P8BGU2, A0A384KCC7

    6. NM_001345560.1 → NP_001332401.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNV8, A0A178URL7, A0A1P8BGU2, A0A384KCC7
    Nucleotide Protein
    Heading Accession and Version

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