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    APC4 Transducin/WD40 repeat-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828238, updated on 18-Sep-2024

    Summary

    Official Symbol
    APC4
    Official Full Name
    Transducin/WD40 repeat-like superfamily protein
    Primary source
    TAIR:AT4G21530
    Locus tag
    AT4G21530
    See related
    Araport:AT4G21530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    anaphase promoting complex 4; F18E5.150; F18E5_150
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    Genomic context

    See APC4 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    19
    Sequence:
    Chromosome: 4; NC_003075.7 (11450552..11456007)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene F-box family protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Diacylglycerol kinase family protein Neighboring gene sphingosine kinase 1

    Pathways from PubChem

    Interactions

    General gene information

    NM_118273.8

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    part_of anaphase-promoting complex  
    located_in nucleus PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    Transducin/WD40 repeat-like superfamily protein
    NP_193884.6
    • Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); Has 2387 Blast hits to 1893 proteins in 265 species: Archae - 2; Bacteria - 820; Metazoa - 693; Fungi - 413; Plants - 211; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11450552..11456007
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118273.8 → NP_193884.6  Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193884.6

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65418
      UniProtKB/TrEMBL
      A0A5S9XUH2
      Conserved Domains (5) summary
      COG2319
      Location:29 → 192
      WD40; WD40 repeat [General function prediction only]
      pfam12894
      Location:14 → 60
      ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
      pfam12896
      Location:268 → 470
      ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4
      sd00039
      Location:68 → 104
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:32 → 120
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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