U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GTP-binding protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821969, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    GTP-binding protein-like protein
    Primary source
    TAIR:AT3G23860
    Locus tag
    AT3G23860
    See related
    Araport:AT3G23860
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (8616804..8619285, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene glycine-rich RNA-binding protein 4 Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene magnesium transporter NIPA (DUF803) Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene topoisomerase II

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Arabidopsis GPR1 Gene Negatively Affects Pollen Germination, Pollen Tube Growth, and Gametophyte Senescence. Yang X, et al. Int J Mol Sci, 2017 Jun 21. PMID 28635622, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001338656.1
    NM_001338657.1
    NM_113291.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within pollen exine formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of pollen tube growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    GTP-binding protein-like protein
    NP_189028.1
    • GTP-binding protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Nucleolar GTP-binding protein (TAIR:AT1G10300.1); Has 385 Blast hits to 385 proteins in 205 species: Archae - 2; Bacteria - 0; Metazoa - 127; Fungi - 131; Plants - 51; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8616804..8619285 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113291.2 → NP_189028.1  GTP-binding protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189028.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EN16, F4J5A2
      Conserved Domains (1) summary
      COG1084
      Location:2 → 165
      Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]

    2. NM_001338656.1 → NP_001327822.1  GTP-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCH9, Q9LIS0
      Conserved Domains (1) summary
      COG1084
      Location:15 → 178
      Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]

    3. NM_001338657.1 → NP_001327821.1  GTP-binding protein-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCH9, Q9LIS0
      Conserved Domains (1) summary
      COG1084
      Location:15 → 178
      Nog1; GTP-binding protein, GTP1/Obg family [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.