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    nucleic acid binding / methyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825016, updated on 18-Sep-2024

    Summary

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    Official Full Name
    nucleic acid binding / methyltransferase
    Primary source
    TAIR:AT3G58470
    Locus tag
    AT3G58470
    See related
    Araport:AT3G58470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (21626671..21628569, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene TRAF-like superfamily protein Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene RHOMBOID-like protein 15 Neighboring gene calmodulin-binding family protein Neighboring gene Phosphatidic acid phosphatase (PAP2) family protein Neighboring gene protein phosphatase 2A-4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115709.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nucleic acid binding / methyltransferase
    NP_567065.1
    • nucleic acid binding;methyltransferases; FUNCTIONS IN: methyltransferase activity, nucleic acid binding; INVOLVED IN: methylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, N-6 adenine-specific, eukaryotic (InterPro:IPR019369), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052); Has 287 Blast hits to 287 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 124; Fungi - 79; Plants - 48; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21626671..21628569 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115709.1 → NP_567065.1  nucleic acid binding / methyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567065.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VA19, A0A384KCH1, A0A5S9XMN1, Q93Z55
      Conserved Domains (1) summary
      pfam10237
      Location:75 → 186
      N6-adenineMlase; Probable N6-adenine methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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