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    MD-2-related lipid recognition domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817177, updated on 18-Sep-2024

    Summary

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    Official Full Name
    MD-2-related lipid recognition domain-containing protein
    Primary source
    TAIR:AT2G26370
    Locus tag
    AT2G26370
    See related
    Araport:AT2G26370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J22.4; T9J22_4
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (11224565..11226235)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene peroxin 10 Neighboring gene ncRNA Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene Serine protease inhibitor (SERPIN) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128194.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in intracellular sterol transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    MD-2-related lipid recognition domain-containing protein
    NP_180205.1
    • MD-2-related lipid recognition domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: MD-2-related lipid-recognition (InterPro:IPR003172); BEST Arabidopsis thaliana protein match is: MD-2-related lipid recognition domain-containing protein (TAIR:AT5G23820.1); Has 39 Blast hits to 39 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11224565..11226235
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128194.4 → NP_180205.1  MD-2-related lipid recognition domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180205.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VVR6, A0A5S9X1C3, O48704
      Conserved Domains (1) summary
      cd00917
      Location:29 → 163
      PG-PI_TP; The phosphatidylinositol/phosphatidylglycerol transfer protein (PG/PI-TP) has been shown to bind phosphatidylglycerol and phosphatidylinositol, but the biological significance of this is still obscure. These proteins belong to the ML domain family.
    Nucleotide Protein
    Heading Accession and Version

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