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    ZIP6 ZIP metal ion transporter family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817559, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ZIP6
    Official Full Name
    ZIP metal ion transporter family
    Primary source
    TAIR:AT2G30080
    Locus tag
    AT2G30080
    See related
    Araport:AT2G30080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATZIP6; T27E13.18; T27E13_18
    Summary
    member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess.
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    Genomic context

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    See ZIP6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (12838620..12840252, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene Pleckstrin homology (PH) domain superfamily protein Neighboring gene potassium transporter 1 Neighboring gene Acyl-CoA N-acyltransferases (NAT) superfamily protein Neighboring gene pentatricopeptide (PPR) repeat-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nematode-induced changes of transporter gene expression in Arabidopsis roots. Hammes UZ, et al. Mol Plant Microbe Interact, 2005 Dec. PMID 16478044
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_128563.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables metal ion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables zinc ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to nematode HEP PubMed 
    involved_in zinc ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ZIP metal ion transporter family
    NP_180569.1
    • ZIP6; FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, response to nematode; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 7 precursor (TAIR:AT2G04032.1); Has 1739 Blast hits to 1619 proteins in 263 species: Archae - 0; Bacteria - 69; Metazoa - 337; Fungi - 628; Plants - 518; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12838620..12840252 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128563.2 → NP_180569.1  ZIP metal ion transporter family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180569.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64738
      UniProtKB/TrEMBL
      A0A178VN05, A0A5S9X2M3, A0A7G2EC63
      Conserved Domains (1) summary
      TIGR00820
      Location:14 → 341
      zip; ZIP zinc/iron transport family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O64738.1

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