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    chromosome-partitioning protein, putative (DUF639) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843465, updated on 18-Sep-2024

    Summary

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    Official Full Name
    chromosome-partitioning protein, putative (DUF639)
    Primary source
    TAIR:AT1G71240
    Locus tag
    AT1G71240
    See related
    Araport:AT1G71240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3I17.11; F3I17_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (26855331..26859844)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene COP9-signalosome 5B Neighboring gene uncharacterized protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene ncRNA Neighboring gene WHIRLY 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084340.2
    NM_001334492.1
    NM_105793.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    chromosome-partitioning protein, putative (DUF639)
    NP_001077809.1
    • Plant protein of unknown function (DUF639); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 140 Blast hits to 137 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_177280.2
    • Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 140 Blast hits to 137 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26855331..26859844
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084340.2 → NP_001077809.1  chromosome-partitioning protein, putative (DUF639) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077809.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRR2, A0A654EPK1, Q9FVV0
      Conserved Domains (1) summary
      pfam04842
      Location:569 → 801
      DUF639; Plant protein of unknown function (DUF639)

    2. NM_105793.3 → NP_177280.2  chromosome-partitioning protein, putative (DUF639) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177280.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRR2, A8MR99
      Conserved Domains (1) summary
      pfam04842
      Location:113 → 802
      DUF639; Plant protein of unknown function (DUF639)

    3. NM_001334492.1 → NP_001323175.1  chromosome-partitioning protein, putative (DUF639) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WA46, A0A1P8AWE7
    Nucleotide Protein
    Heading Accession and Version

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