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    BGAL17 beta-galactosidase 17 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843630, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BGAL17
    Official Full Name
    beta-galactosidase 17
    Primary source
    TAIR:AT1G72990
    Locus tag
    AT1G72990
    See related
    Araport:AT1G72990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    beta-galactosidase 17; F3N23.19; F3N23_19
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    Genomic context

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    See BGAL17 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Sequence:
    Chromosome: 1; NC_003070.9 (27457266..27462487, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene LOB domain-containing protein 7 Neighboring gene PYR1-like 3 Neighboring gene inorganic pyrophosphatase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036196.2
    NM_001334559.1
    NM_001334560.1
    NM_105957.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables beta-galactosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    beta-galactosidase 17
    NP_001031273.1
    • beta-galactosidase 17 (BGAL17); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_565051.1
    • beta-galactosidase 17 (BGAL17); FUNCTIONS IN: cation binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-galactosidase 3 (TAIR:AT4G36360.2); Has 2090 Blast hits to 2034 proteins in 466 species: Archae - 15; Bacteria - 876; Metazoa - 411; Fungi - 209; Plants - 521; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27457266..27462487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105957.3 → NP_565051.1  beta-galactosidase 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565051.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V4C9, Q93Z24, Q9SSM8
      UniProtKB/TrEMBL
      A0A178WKK4, A0A5S9WTW9, A0A654EQ60
      Conserved Domains (2) summary
      pfam01301
      Location:69 → 394
      Glyco_hydro_35; Glycosyl hydrolases family 35
      pfam13364
      Location:601 → 665
      BetaGal_dom4_5; Beta-galactosidase jelly roll domain

    2. NM_001036196.2 → NP_001031273.1  beta-galactosidase 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031273.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKK4
      Conserved Domains (2) summary
      pfam01301
      Location:24 → 332
      Glyco_hydro_35; Glycosyl hydrolases family 35
      pfam13364
      Location:539 → 603
      BetaGal_dom4_5; Beta-galactosidase jelly roll domain

    3. NM_001334560.1 → NP_001321343.1  beta-galactosidase 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V4C9, Q93Z24, Q9SSM8
      UniProtKB/TrEMBL
      A0A178WKK4, A0A5S9WTW9, A0A654EQ60

    4. NM_001334559.1 → NP_001321344.1  beta-galactosidase 17 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKK4, A0A1P8AQM6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93Z24.1

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