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    TBC1D23 TBC1 domain family member 23 [ Bos taurus (domestic cattle) ]

    Gene ID: 518370, updated on 27-Dec-2024

    Summary

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    Official Symbol
    TBC1D23provided by VGNC
    Official Full Name
    TBC1 domain family member 23provided by VGNC
    Primary source
    VGNC:VGNC:35638
    See related
    BGD:BT18413; Ensembl:ENSBTAG00000015010
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TBC1D23 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 1 NC_037328.1 (44555389..44612116)

    Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene filamin A interacting protein 1 like Neighboring gene cms1 ribosomal small subunit homolog Neighboring gene transmembrane protein 30C Neighboring gene nitrilase family member 2 Neighboring gene translocase of outer mitochondrial membrane 70 Neighboring gene leukemia NUP98 fusion partner 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037328.1 Chromosome 1 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in embryonic brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TBC1 domain family member 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037328.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      44555389..44612116
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005201221.5 → XP_005201278.2  TBC1 domain family member 23 isoform X1

      UniProtKB/TrEMBL
      A0AAA9T4H4
      Related
      ENSBTAP00000091572.1, ENSBTAT00000109527.1
      Conserved Domains (2) summary
      pfam00566
      Location:48 → 246
      RabGAP-TBC; Rab-GTPase-TBC domain
      pfam00581
      Location:334 → 384
      Rhodanese; Rhodanese-like domain

    2. XM_002684708.7 → XP_002684754.3  TBC1 domain family member 23 isoform X2

      UniProtKB/TrEMBL
      A0AAA9T4H4, F1MU30
      Related
      ENSBTAP00000032319.6, ENSBTAT00000032386.6
      Conserved Domains (2) summary
      pfam00566
      Location:48 → 246
      RabGAP-TBC; Rab-GTPase-TBC domain
      pfam00581
      Location:334 → 384
      Rhodanese; Rhodanese-like domain
    Nucleotide Protein Strain
    Heading Accession and Version

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