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    BASP1 brain abundant membrane attached signal protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 286842, updated on 27-Dec-2024

    Summary

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    Official Symbol
    BASP1provided by VGNC
    Official Full Name
    brain abundant membrane attached signal protein 1provided by VGNC
    Primary source
    VGNC:VGNC:106649
    See related
    Ensembl:ENSBTAG00000048565
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    NAP22
    Orthologs
    human mouse all
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    Genomic context

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    See BASP1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 20 NC_037347.1 (55908760..55964157, complement)

    Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107131579 Neighboring gene small ribosomal subunit protein uS3-like Neighboring gene uncharacterized LOC100849043 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Ion channel activity of brain abundant protein BASP1 in planar lipid bilayers. Ostroumova OS, et al. FEBS J, 2011 Feb. PMID 21156029
    2. Oligomeric structure of brain abundant proteins GAP-43 and BASP1. Zakharov VV, et al. J Struct Biol, 2010 Jun. PMID 20109554
    3. Characterization of bovine and human cDNAs encoding NAP-22 (22 kDa neuronal tissue-enriched acidic protein) homologs. Park S, et al. Mol Cells, 1998 Aug 31. PMID 9749536
    4. The BASP1 family of myristoylated proteins abundant in axonal termini. Primary structure analysis and physico-chemical properties. Mosevitsky MI, et al. Biochimie, 1997 Jun. PMID 9310187
    5. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Ion channel activity of brain abundant protein BASP1 in planar lipid bilayer
      Title: Ion channel activity of brain abundant protein BASP1 in planar lipid bilayers.
    2. BASP1 fragment truncated by the short N-terminal myristoylated peptide was unable to form oligomers.
      Title: Oligomeric structure of brain abundant proteins GAP-43 and BASP1.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    brain acid soluble protein 1
    Names
    22 kDa neuronal tissue-enriched acidic protein
    neuronal axonal membrane protein NAP-22

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174780.3 → NP_777205.1  brain acid soluble protein 1

      See identical proteins and their annotated locations for NP_777205.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123462
      UniProtKB/Swiss-Prot
      O02692, P80724, Q08E19
      Related
      ENSBTAP00000056785.1, ENSBTAT00000078276.2
      Conserved Domains (1) summary
      pfam05466
      Location:12 → 227
      BASP1; Brain acid soluble protein 1 (BASP1 protein)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55908760..55964157 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024981219.2 → XP_024836987.1  brain acid soluble protein 1 isoform X1

      UniProtKB/Swiss-Prot
      O02692, P80724, Q08E19
      Conserved Domains (1) summary
      pfam05466
      Location:12 → 227
      BASP1; Brain acid soluble protein 1 (BASP1 protein)

    2. XM_024981215.2 → XP_024836983.1  brain acid soluble protein 1 isoform X1

      UniProtKB/Swiss-Prot
      O02692, P80724, Q08E19
      Related
      ENSBTAP00000088422.1, ENSBTAT00000113106.1
      Conserved Domains (1) summary
      pfam05466
      Location:12 → 227
      BASP1; Brain acid soluble protein 1 (BASP1 protein)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P80724.3 GenPept UniProtKB/Swiss-Prot:P80724

    Gene LinkOut

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