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    WIPF1 WAS/WASL interacting protein family member 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 540304, updated on 27-Dec-2024

    Summary

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    Official Symbol
    WIPF1provided by VGNC
    Official Full Name
    WAS/WASL interacting protein family member 1provided by VGNC
    Primary source
    VGNC:VGNC:36939
    See related
    BGD:BT27415; Ensembl:ENSBTAG00000001585
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    PRPL-2; WASPIP
    Orthologs
    human mouse all
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    Genomic context

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    See WIPF1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (22130119..22259091)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene chimerin 1 Neighboring gene cholinergic receptor nicotinic alpha 1 subunit Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene uncharacterized LOC107132241 Neighboring gene U6 spliceosomal RNA Neighboring gene G protein-coupled receptor 155

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WAS/WASL-interacting protein family member 1
    Names
    WASP interacting protein
    Wiskott-Aldrich syndrome protein interacting protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076923.2 → NP_001070391.1  WAS/WASL-interacting protein family member 1

      See identical proteins and their annotated locations for NP_001070391.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123527
      UniProtKB/TrEMBL
      A0A3Q1LQN5, F6QPK8, Q08DX4
      Related
      ENSBTAP00000002076.6, ENSBTAT00000002076.6
      Conserved Domains (2) summary
      pfam02205
      Location:31 → 55
      WH2; WH2 motif
      cl26464
      Location:108 → 331
      Atrophin-1; Atrophin-1 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      22130119..22259091
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876173.1 → XP_059732156.1  WAS/WASL-interacting protein family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LQN5, F6QPK8, Q08DX4

    2. XM_005202348.5 → XP_005202405.2  WAS/WASL-interacting protein family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LQN5, F6QPK8, Q08DX4
      Related
      ENSBTAP00000077561.1, ENSBTAT00000126547.1
      Conserved Domains (2) summary
      pfam02205
      Location:31 → 55
      WH2; WH2 motif
      cl26464
      Location:108 → 331
      Atrophin-1; Atrophin-1 family

    3. XM_015474954.3 → XP_015330440.2  WAS/WASL-interacting protein family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LQN5, F6QPK8, Q08DX4
      Conserved Domains (2) summary
      pfam02205
      Location:31 → 55
      WH2; WH2 motif
      cl26464
      Location:108 → 331
      Atrophin-1; Atrophin-1 family

    4. XM_005202349.5 → XP_005202406.2  WAS/WASL-interacting protein family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LQN5, F6QPK8, Q08DX4
      Conserved Domains (2) summary
      pfam02205
      Location:31 → 55
      WH2; WH2 motif
      cl26464
      Location:108 → 331
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein Strain
    Heading Accession and Version

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