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    VAMP712 vesicle-associated membrane protein 712 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817072, updated on 18-Sep-2024

    Summary

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    Official Symbol
    VAMP712
    Official Full Name
    vesicle-associated membrane protein 712
    Primary source
    TAIR:AT2G25340
    Locus tag
    AT2G25340
    See related
    Araport:AT2G25340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATVAMP712; T22F11.7; T22F11_7; vesicle-associated membrane protein 712
    Summary
    Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.
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    Genomic context

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    See VAMP712 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (10792664..10793832, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene TRAF-like family protein Neighboring gene TRAF-like family protein Neighboring gene low-molecular-weight cysteine-rich 14 Neighboring gene Phox (PX) domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The longin domain regulates subcellular targeting of VAMP7 in Arabidopsis thaliana. Uemura T, et al. FEBS Lett, 2005 May 23. PMID 15876431
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in vacuolar membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vesicle-associated membrane protein 712
    NP_180106.1
    • vesicle-associated membrane protein 712 (VAMP712); INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: vacuolar membrane, membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 713 (TAIR:AT5G11150.1); Has 2449 Blast hits to 2448 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 945; Fungi - 513; Plants - 550; Viruses - 3; Other Eukaryotes - 438 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10792664..10793832 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128091.1 → NP_180106.1  vesicle-associated membrane protein 712 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180106.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SIQ9
      UniProtKB/TrEMBL
      A0A178VTB3, A0A5S9X180
      Conserved Domains (2) summary
      cd14824
      Location:4 → 118
      Longin; longin domain
      pfam00957
      Location:123 → 211
      Synaptobrevin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SIQ9.1

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