U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CXCL17 C-X-C motif chemokine ligand 17 [ Bos taurus (domestic cattle) ]

    Gene ID: 788717, updated on 27-Dec-2024

    Summary

    Official Symbol
    CXCL17provided by VGNC
    Official Full Name
    C-X-C motif chemokine ligand 17provided by VGNC
    Primary source
    VGNC:VGNC:27852
    See related
    BGD:BT16625; Ensembl:ENSBTAG00000018652
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CXCL17 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (51500302..51506868, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100336941 Neighboring gene carcinoembryonic antigen-related cell adhesion molecule 21 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene CD177 molecule Neighboring gene BRISC complex subunit Abraxas 2-like Neighboring gene testis expressed 101

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    C-X-C motif chemokine 17
    Names
    VEGF co-regulated chemokine 1
    VEGF coregulated chemokine 1
    chemokine (C-X-C motif) ligand 17

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083799.2NP_001077268.1  C-X-C motif chemokine 17 precursor

      See identical proteins and their annotated locations for NP_001077268.1

      Status: PROVISIONAL

      Source sequence(s)
      BC134719
      UniProtKB/Swiss-Prot
      A4IFR0
      Related
      ENSBTAP00000024820.4, ENSBTAT00000024820.6
      Conserved Domains (1) summary
      pfam15211
      Location:25109
      CXCL17; VEGF co-regulated chemokine 1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      51500302..51506868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)