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    CAMSAP1 calmodulin regulated spectrin associated protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 506553, updated on 30-Jan-2025

    Summary

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    Official Symbol
    CAMSAP1provided by VGNC
    Official Full Name
    calmodulin regulated spectrin associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:26730
    See related
    BGD:BT13579; EnsemblRapid:ENSBTAG00070010485
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CAMSAP1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (103394881..103437999, complement)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis and oogenesis specific basic helix-loop-helix 1 Neighboring gene potassium sodium-activated channel subfamily T member 1 Neighboring gene uncharacterized LOC132346645 Neighboring gene UBA domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule minus-end binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables spectrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of microtubule depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule minus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calmodulin-regulated spectrin-associated protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192096.1 → NP_001179025.1  calmodulin-regulated spectrin-associated protein 1

      See identical proteins and their annotated locations for NP_001179025.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000011
      UniProtKB/TrEMBL
      F1MYW2
      Conserved Domains (5) summary
      smart01051
      Location:1437 → 1565
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam11971
      Location:232 → 312
      CAMSAP_CH; CAMSAP CH domain
      pfam13863
      Location:1248 → 1329
      DUF4200; Domain of unknown function (DUF4200)
      pfam15346
      Location:1250 → 1327
      ARGLU; Arginine and glutamate-rich 1
      pfam17095
      Location:853 → 911
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      103394881..103437999 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010810399.4 → XP_010808701.1  calmodulin-regulated spectrin-associated protein 1 isoform X5

      UniProtKB/TrEMBL
      F1MYW2
      Conserved Domains (6) summary
      smart01051
      Location:1423 → 1551
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam11971
      Location:232 → 312
      CAMSAP_CH; CAMSAP CH domain
      pfam13863
      Location:1234 → 1315
      DUF4200; Domain of unknown function (DUF4200)
      pfam15346
      Location:1236 → 1313
      ARGLU; Arginine and glutamate-rich 1
      pfam15662
      Location:356 → 472
      SPATA3; Spermatogenesis-associated protein 3 family
      pfam17095
      Location:839 → 897
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin

    2. XM_059891095.1 → XP_059747078.1  calmodulin-regulated spectrin-associated protein 1 isoform X3

      UniProtKB/TrEMBL
      F1MYW2
      Related
      ENSBTAP00070013852.1, ENSBTAT00070023454.1

    3. XM_059891094.1 → XP_059747077.1  calmodulin-regulated spectrin-associated protein 1 isoform X2

      UniProtKB/TrEMBL
      F1MYW2

    4. XM_010810395.4 → XP_010808697.1  calmodulin-regulated spectrin-associated protein 1 isoform X1

      UniProtKB/TrEMBL
      F1MYW2
      Conserved Domains (6) summary
      smart01051
      Location:1435 → 1563
      CAMSAP_CKK; Microtubule-binding calmodulin-regulated spectrin-associated
      pfam11971
      Location:243 → 323
      CAMSAP_CH; CAMSAP CH domain
      pfam13863
      Location:1245 → 1326
      DUF4200; Domain of unknown function (DUF4200)
      pfam15346
      Location:1247 → 1324
      ARGLU; Arginine and glutamate-rich 1
      pfam15662
      Location:367 → 483
      SPATA3; Spermatogenesis-associated protein 3 family
      pfam17095
      Location:850 → 908
      CAMSAP_CC1; Spectrin-binding region of Ca2+-Calmodulin

    5. XM_059891096.1 → XP_059747079.1  calmodulin-regulated spectrin-associated protein 1 isoform X4

      UniProtKB/TrEMBL
      F1MYW2
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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