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    RING finger PFF0165c-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834498, updated on 18-Sep-2024

    Summary

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    Official Full Name
    RING finger PFF0165c-like protein
    Primary source
    TAIR:AT5G44690
    Locus tag
    AT5G44690
    See related
    Araport:AT5G44690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K23L20.2; K23L20_2
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (18029338..18032293, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene glycosyltransferase family protein (DUF23) Neighboring gene DNA glycosylase superfamily protein Neighboring gene Leucine-rich repeat transmembrane protein kinase Neighboring gene tRNA-Thr

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123836.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RING finger PFF0165c-like protein
    NP_199282.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18029338..18032293 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123836.2 → NP_199282.2  RING finger PFF0165c-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199282.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YB76, F4KAC4
      Conserved Domains (1) summary
      PTZ00121
      Location:294 → 472
      PTZ00121; MAEBL; Provisional
    Nucleotide Protein
    Heading Accession and Version

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