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    DTW domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835579, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DTW domain-containing protein
    Primary source
    TAIR:AT5G54880
    Locus tag
    AT5G54880
    See related
    Araport:AT5G54880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MBG8.15; MBG8_15
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (22291860..22293300)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tRNA-Met Neighboring gene inositol-1,4,5-trisphosphate 5-phosphatase Neighboring gene RNA-binding CRS1 / YhbY (CRM) domain-containing protein Neighboring gene RNA-binding protein 45A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the enzymes responsible for m2,2G and acp3U formation on cytosolic tRNA from insects and plants. Funk HM, et al. PLoS One, 2020. PMID 33253256, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124870.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables tRNA-uridine aminocarboxypropyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within tRNA modification IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    DTW domain-containing protein
    NP_568814.2
    • DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22291860..22293300
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124870.4 → NP_568814.2  DTW domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568814.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAI6, Q9FFU2
      Conserved Domains (1) summary
      pfam03942
      Location:275 → 383
      DTW; DTW domain
    Nucleotide Protein
    Heading Accession and Version

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