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    SEC10 exocyst complex component sec10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831112, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SEC10
    Official Full Name
    exocyst complex component sec10
    Primary source
    TAIR:AT5G12370
    Locus tag
    AT5G12370
    See related
    Araport:AT5G12370
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    exocyst complex component sec10
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    Genomic context

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    See SEC10 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    25
    Sequence:
    Chromosome: 5; NC_003076.8 (4002742..4008804, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DUF4228 domain protein Neighboring gene Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene annexin 8 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Exo70E2 is essential for exocyst subunit recruitment and EXPO formation in both plants and animals. Ding Y, et al. Mol Biol Cell, 2014 Feb. PMID 24307681, Free PMC Article
    2. An exocyst complex functions in plant cell growth in Arabidopsis and tobacco. Hála M, et al. Plant Cell, 2008 May. PMID 18492870, Free PMC Article
    3. BYPASS1-LIKE regulates lateral root initiation via exocytic vesicular trafficking-mediated PIN recycling in Arabidopsis. Yang G, et al. J Integr Plant Biol, 2022 May. PMID 35249253
    4. RNA Silencing of Exocyst Genes in the Stigma Impairs the Acceptance of Compatible Pollen in Arabidopsis. Safavian D, et al. Plant Physiol, 2015 Dec. PMID 26443677, Free PMC Article
    5. Plant cytokinesis is orchestrated by the sequential action of the TRAPPII and exocyst tethering complexes. Rybak K, et al. Dev Cell, 2014 Jun 9. PMID 24882377

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001036794.2
    NM_001036795.2
    NM_121275.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within acceptance of pollen IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    part_of exocyst IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular exosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    exocyst complex component sec10
    NP_001031871.1
    • exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 527 Blast hits to 483 proteins in 172 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 247; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
    NP_001031872.1
    • exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 533 Blast hits to 489 proteins in 174 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 253; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
    NP_568270.3
    • exocyst complex component sec10 (SEC10); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: exocytosis, vesicle docking; LOCATED IN: plasma membrane, membrane, exocyst; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exocyst complex component Sec10 (InterPro:IPR009976); Has 527 Blast hits to 483 proteins in 172 species: Archae - 0; Bacteria - 6; Metazoa - 178; Fungi - 247; Plants - 59; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4002742..4008804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036794.2 → NP_001031871.1  exocyst complex component sec10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031871.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56W60, Q8RVQ5, Q94CK5, X5JA13
      UniProtKB/TrEMBL
      A0A654G0N5
      Conserved Domains (1) summary
      pfam07393
      Location:139 → 817
      Sec10; Exocyst complex component Sec10

    2. NM_121275.4 → NP_568270.3  exocyst complex component sec10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568270.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56W60, Q8RVQ5, Q94CK5, X5JA13
      UniProtKB/TrEMBL
      A0A654G0N5
      Conserved Domains (1) summary
      pfam07393
      Location:139 → 817
      Sec10; Exocyst complex component Sec10

    3. NM_001036795.2 → NP_001031872.1  exocyst complex component sec10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031872.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G0N5, F4K0X7
      Conserved Domains (1) summary
      pfam07393
      Location:139 → 812
      Sec10; Exocyst complex component Sec10
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    X5JA13.1

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