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    proteinase inhibitor I25, cystatin, motif protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835801, updated on 18-Sep-2024

    Summary

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    Official Full Name
    proteinase inhibitor I25, cystatin, motif protein
    Primary source
    TAIR:AT5G56990
    Locus tag
    AT5G56990
    See related
    Araport:AT5G56990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MHM17.11; MHM17_11
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (23060833..23062400, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene cotton fiber protein Neighboring gene uncharacterized protein Neighboring gene DEAD-box ATP-dependent RNA helicase Neighboring gene calmodulin-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001345228.1
    NM_125081.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    proteinase inhibitor I25, cystatin, motif protein
    NP_200509.2
    • BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT5G56920.1); Has 38 Blast hits to 38 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23060833..23062400 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125081.3 → NP_200509.2  proteinase inhibitor I25, cystatin, motif protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200509.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5XUY6
      Conserved Domains (1) summary
      TIGR01638
      Location:14 → 69
      Atha_cystat_rel; Arabidopsis thaliana cystatin-related protein

    2. NM_001345228.1 → NP_001331827.1  proteinase inhibitor I25, cystatin, motif protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BF61
    Nucleotide Protein
    Heading Accession and Version

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