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    S-locus lectin protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826797, updated on 18-Sep-2024

    Summary

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    Official Full Name
    S-locus lectin protein kinase family protein
    Primary source
    TAIR:AT4G11900
    Locus tag
    AT4G11900
    See related
    Araport:AT4G11900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T26M18.110; T26M18_110
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (7149903..7153681, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene AGAMOUS-like 14 Neighboring gene Protein kinase superfamily protein Neighboring gene STAY-GREEN-like protein Neighboring gene STAY-GREEN-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001340743.1
    NM_001340744.1
    NM_001340745.1
    NM_001340746.1
    NM_001340747.1
    NM_001340748.1
    NM_001340749.1
    NM_001340750.1
    NM_001340751.1
    NM_117260.8

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calmodulin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in recognition of pollen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    S-locus lectin protein kinase family protein
    NP_192927.5
    • S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G61550.1); Has 124676 Blast hits to 123050 proteins in 4525 species: Archae - 110; Bacteria - 13929; Metazoa - 45657; Fungi - 10878; Plants - 35196; Viruses - 465; Other Eukaryotes - 18441 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7149903..7153681 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117260.8 → NP_192927.5  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192927.5

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q682D0, Q9T058
      UniProtKB/TrEMBL
      A0A178V4X9
      Conserved Domains (6) summary
      smart00108
      Location:33 → 184
      B_lectin; Bulb-type mannose-specific lectin
      cd14066
      Location:543 → 808
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00069
      Location:537 → 805
      Pkinase; Protein kinase domain
      pfam00954
      Location:238 → 346
      S_locus_glycop; S-locus glycoprotein domain
      pfam01453
      Location:78 → 207
      B_lectin; D-mannose binding lectin
      pfam08276
      Location:368 → 431
      PAN_2; PAN-like domain

    2. NM_001340746.1 → NP_001329090.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4X9, A0A1P8B6M9

    3. NM_001340745.1 → NP_001329093.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4X9, A0A1P8B6N6

    4. NM_001340744.1 → NP_001329092.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4X9, A0A1P8B6N6

    5. NM_001340747.1 → NP_001329091.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EZ29

    6. NM_001340749.1 → NP_001329089.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4X9, A0A1P8B6N1

    7. NM_001340748.1 → NP_001329088.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4X9, A0A1P8B6M9

    8. NM_001340751.1 → NP_001329087.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V4X9, A0A1P8B6M8

    9. NM_001340750.1 → NP_001329086.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B6N5

    10. NM_001340743.1 → NP_001329085.1  S-locus lectin protein kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EZ29
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9T058.1

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