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    cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819263, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter
    Primary source
    TAIR:AT2G46520
    Locus tag
    AT2G46520
    See related
    Araport:AT2G46520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11C10.33
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (19096413..19100373)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ABA-inducible BHLH-type transcription factor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene auxin response factor 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    2. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    3. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_130217.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter
    NP_182175.1
    • cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 461; Fungi - 384; Plants - 163; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19096413..19100373
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130217.4 → NP_182175.1  cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182175.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56WE2, Q7GA14, Q9ZPY7
      UniProtKB/TrEMBL
      A0A178VTU6, A0A5S9X7K4
      Conserved Domains (3) summary
      pfam03378
      Location:531 → 963
      CAS_CSE1; CAS/CSE protein, C-terminus
      pfam03810
      Location:29 → 104
      IBN_N; Importin-beta N-terminal domain
      pfam08506
      Location:162 → 529
      Cse1; Cse1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZPY7.1

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