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    RPM1-interacting protein 4 (RIN4) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816273, updated on 18-Sep-2024

    Summary

    Official Full Name
    RPM1-interacting protein 4 (RIN4) family protein
    Primary source
    TAIR:AT2G17660
    Locus tag
    AT2G17660
    See related
    Araport:AT2G17660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (7673145..7673712)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Trimeric LpxA-like enzymes superfamily protein Neighboring gene AMP-dependent synthetase and ligase family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene DUF241 domain protein, putative (DUF241)

    General protein information

    Preferred Names
    RPM1-interacting protein 4 (RIN4) family protein
    NP_179357.1
    • RPM1-interacting protein 4 (RIN4) family protein; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT4G35655.1); Has 277 Blast hits to 276 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 275; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7673145..7673712
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127320.3NP_179357.1  RPM1-interacting protein 4 (RIN4) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179357.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W022, Q9SEY4
      Conserved Domains (1) summary
      pfam05627
      Location:540
      AvrRpt-cleavage; Cleavage site for pathogenic type III effector avirulence factor Avr