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    SMAD/FHA domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842364, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SMAD/FHA domain-containing protein
    Primary source
    TAIR:AT1G60700
    Locus tag
    AT1G60700
    See related
    Araport:AT1G60700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8A5.22; F8A5_22
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (22351804..22354517, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein (DUF3755) Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene RNA-directed DNA polymerase (reverse transcriptase)-related family protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001333910.1
    NM_104753.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables G-quadruplex RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of MLL1 complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SMAD/FHA domain-containing protein
    NP_176269.2
    • SMAD/FHA domain-containing protein; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: Forkhead-associated (FHA) domain-containing protein (TAIR:AT3G54350.3); Has 241 Blast hits to 241 proteins in 78 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 2; Plants - 57; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22351804..22354517 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104753.4 → NP_176269.2  SMAD/FHA domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176269.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WNJ5, F4HPY1, Q0WTA8
      Conserved Domains (1) summary
      cd00060
      Location:410 → 500
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...

    2. NM_001333910.1 → NP_001323076.1  SMAD/FHA domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVZ3, Q0WTA8
    Nucleotide Protein
    Heading Accession and Version

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