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    MATE efflux family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842994, updated on 18-Sep-2024

    Summary

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    Official Full Name
    MATE efflux family protein
    Primary source
    TAIR:AT1G66760
    Locus tag
    AT1G66760
    See related
    Araport:AT1G66760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4N21.11; F4N21_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (24901882..24904443)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ASF1 like histone chaperone Neighboring gene CDK-activating kinase 4 Neighboring gene Nodulin MtN3 family protein Neighboring gene MATE efflux family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A downstream mediator in the growth repression limb of the jasmonate pathway. Yan Y, et al. Plant Cell, 2007 Aug. PMID 17675405, Free PMC Article
    2. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    3. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001334246.1
    NM_001334247.1
    NM_105347.3
    NM_179523.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables xenobiotic transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in xenobiotic detoxification by transmembrane export across the plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MATE efflux family protein
    NP_564883.2
    • MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to wounding; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G66780.1); Has 11372 Blast hits to 11171 proteins in 2068 species: Archae - 239; Bacteria - 8285; Metazoa - 148; Fungi - 331; Plants - 1323; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink).
    NP_849854.1
    • MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to wounding; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT1G66780.1); Has 11176 Blast hits to 10988 proteins in 2036 species: Archae - 239; Bacteria - 8105; Metazoa - 148; Fungi - 328; Plants - 1324; Viruses - 0; Other Eukaryotes - 1032 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24901882..24904443
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179523.4 → NP_849854.1  MATE efflux family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849854.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C5H0, Q9C9M8
      UniProtKB/TrEMBL
      A0A178WEJ3, A0A5S9WSF0, A0A654ELL1
      Conserved Domains (1) summary
      cd13132
      Location:28 → 464
      MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family

    2. NM_001334246.1 → NP_001321858.1  MATE efflux family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AS85

    3. NM_001334247.1 → NP_001321857.1  MATE efflux family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WEJ3, A0A1P8AS72

    4. NM_105347.3 → NP_564883.2  MATE efflux family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564883.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WEJ3, F4HQ03
      Conserved Domains (2) summary
      COG0534
      Location:26 → 466
      NorM; Na+-driven multidrug efflux pump [Defense mechanisms]
      cd13132
      Location:28 → 462
      MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9M8.1

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