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    RIC2 ROP-interactive CRIB motif-containing protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839627, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RIC2
    Official Full Name
    ROP-interactive CRIB motif-containing protein 2
    Primary source
    TAIR:AT1G27380
    Locus tag
    AT1G27380
    See related
    Araport:AT1G27380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17L21.16; F17L21_16; ROP-interactive CRIB motif-containing protein 2
    Summary
    encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC4 (family subgroup V). Gene is expressed in all tissues examined.
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    Genomic context

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    See RIC2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (9508680..9510269, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene squamosa promoter-like 11 Neighboring gene squamosa promoter binding protein-like 10 Neighboring gene phosphoribosylformylglycinamidine synthase Neighboring gene translocase outer membrane 20-2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide analysis of Arabidopsis Rop-interactive CRIB motif-containing proteins that act as Rop GTPase targets. Wu G, et al. Plant Cell, 2001 Dec. PMID 11752391, Free PMC Article
    2. An integrative approach to the identification of Arabidopsis and rice genes involved in xylan and secondary wall development. Oikawa A, et al. PLoS One, 2010 Nov 23. PMID 21124849, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102500.3
    NM_179382.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within pollen tube growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ROP-interactive CRIB motif-containing protein 2
    NP_564281.2
    • ROP-interactive CRIB motif-containing protein 2 (RIC2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); Has 111 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_849713.1
    • ROP-interactive CRIB motif-containing protein 2 (RIC2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube growth; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095); Has 111 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 111; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9508680..9510269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332758.1 → NP_001321074.1  ROP-interactive CRIB motif-containing protein 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WAB0, A0A1P8APS5, A0A384KSI6, A0A654EDB8
      Conserved Domains (1) summary
      smart00285
      Location:127 → 162
      PBD; P21-Rho-binding domain

    2. NM_001332757.1 → NP_001321075.1  ROP-interactive CRIB motif-containing protein 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APT1

    3. NM_102500.3 → NP_564281.2  ROP-interactive CRIB motif-containing protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564281.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GYU0, Q8VWR4, Q9FZJ8
      UniProtKB/TrEMBL
      A0A178WC56
      Conserved Domains (1) summary
      smart00285
      Location:71 → 106
      PBD; P21-Rho-binding domain

    4. NM_179382.1 → NP_849713.1  ROP-interactive CRIB motif-containing protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849713.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GYU0, Q8VWR4, Q9FZJ8
      UniProtKB/TrEMBL
      A0A178WC56
      Conserved Domains (1) summary
      smart00285
      Location:71 → 106
      PBD; P21-Rho-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GYU0.1

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