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    TAF RNA polymerase I subunit A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841754, updated on 18-Sep-2024

    Summary

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    Official Full Name
    TAF RNA polymerase I subunit A
    Primary source
    TAIR:AT1G53200
    Locus tag
    AT1G53200
    See related
    Araport:AT1G53200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12M16.11; F12M16_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (19840368..19843499, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ethylene response factor 8 Neighboring gene uncharacterized protein Neighboring gene RING/U-box superfamily protein Neighboring gene sodium/calcium exchanger family protein / calcium-binding EF hand family protein Neighboring gene tRNA-Ile

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_104199.4
    NM_202286.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase I IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of RNA polymerase I transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    TAF RNA polymerase I subunit A
    NP_175728.2
    • unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_974015.1
    • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19840368..19843499 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104199.4 → NP_175728.2  TAF RNA polymerase I subunit A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175728.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLU1, A0A5S9WLE6, F4HPS6
      Conserved Domains (1) summary
      pfam14929
      Location:82 → 585
      TAF1_subA; TAF RNA Polymerase I subunit A

    2. NM_202286.2 → NP_974015.1  TAF RNA polymerase I subunit A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974015.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HPS7
      Conserved Domains (1) summary
      pfam14929
      Location:19 → 446
      TAF1_subA; TAF RNA Polymerase I subunit A
    Nucleotide Protein
    Heading Accession and Version

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