GSTU20 glutathione S-transferase TAU 20 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: GSTU20
Official Full Name: glutathione S-transferase TAU 20
Primary source: TAIR:AT1G78370
Locus tag: AT1G78370
See related: Araport:AT1G78370
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATGSTU20; F3F9.23; F3F9_23; glutathione S-transferase TAU 20
Summary: Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).
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Genomic context

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See GSTU20 in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 2

Sequence:: Chromosome: 1; NC_003070.9 (29484120..29485389, complement)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

FIP1 interacts with FIN219 to regulate cell elongation and flowering in response to light.
Title: Glutathione S-transferase interacting with far-red insensitive 219 is involved in phytochrome A-mediated signaling in Arabidopsis.

Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_106484.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables enzyme binding	IPI Inferred from Physical Interaction more info	PubMed
enables glutathione binding	IDA Inferred from Direct Assay more info	PubMed
enables glutathione transferase activity	IDA Inferred from Direct Assay more info	PubMed
enables glutathione transferase activity	IMP Inferred from Mutant Phenotype more info	PubMed

Process	Evidence Code	Pubs
involved_in glutathione metabolic process	IEA Inferred from Electronic Annotation more info
involved_in regulation of response to red or far red light	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in response to gravity	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within toxin catabolic process	TAS Traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
located_in apoplast	HDA more info	PubMed
located_in chloroplast	HDA more info	PubMed
located_in cytoplasm	IDA Inferred from Direct Assay more info	PubMed
located_in cytoplasm	ISM Inferred from Sequence Model more info
located_in cytoplasm	NAS Non-traceable Author Statement more info	PubMed
located_in cytosol	HDA more info	PubMed
located_in cytosol	IDA Inferred from Direct Assay more info	PubMed
located_in mitochondrion	HDA more info	PubMed
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: glutathione S-transferase TAU 20

NP_177958.1

glutathione S-transferase TAU 20 (GSTU20); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 7354 Blast hits to 7257 proteins in 1180 species: Archae - 0; Bacteria - 3234; Metazoa - 910; Fungi - 219; Plants - 2135; Viruses - 0; Other Eukaryotes - 856 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

29484120..29485389 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_106484.4 → NP_177958.1 glutathione S-transferase TAU 20 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_177958.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q8L7C9, Q8LBS3, Q9M9F4

UniProtKB/TrEMBL

A0A178W4D4, A0A5S9WVF4, A0A654F0Y6

Conserved Domains (2) summary

cd03185
Location:89 → 209

GST_C_Tau; C-terminal, alpha helical domain of Class Tau Glutathione S-transferases

cd03058
Location:6 → 78

GST_N_Tau; GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, ...