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    dpr-1 Nuclear receptor domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187759, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dpr-1
    Official Full Name
    Nuclear receptor domain-containing protein
    Primary source
    WormBase:WBGene00001062
    Locus tag
    CELE_R10D12.2
    See related
    AllianceGenome:WB:WBGene00001062
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See dpr-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (13940139..13942182, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene pseudo Neighboring gene 7TM GPCR serpentine receptor class x (Srx) domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic redundancy in endoderm specification within the genus Caenorhabditis. Maduro MF, et al. Dev Biol, 2005 Aug 15. PMID 15979606
    2. Wnt/Frizzled signaling controls C. elegans gastrulation by activating actomyosin contractility. Lee JY, et al. Curr Biol, 2006 Oct 24. PMID 17055977, Free PMC Article
    3. Initiation and early patterning of the endoderm. Clements D, et al. Int Rev Cytol, 2001. PMID 11131522
    4. The maternal-to-zygotic transition in embryonic patterning of Caenorhabditis elegans. Newman-Smith ED, et al. Curr Opin Genet Dev, 1998 Aug. PMID 9729725
    5. Making worm guts: the gene regulatory network of the Caenorhabditis elegans endoderm. Maduro MF, et al. Dev Biol, 2002 Jun 1. PMID 12027435

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Nuclear receptor domain-containing protein
    NP_506457.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      13940139..13942182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074056.4 → NP_506457.2  Nuclear receptor domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506457.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XVK1
      Conserved Domains (2) summary
      smart00399
      Location:15 → 85
      ZnF_C4; c4 zinc finger in nuclear hormone receptors
      smart00430
      Location:190 → 338
      HOLI; Ligand binding domain of hormone receptors
    Nucleotide Protein
    Heading Accession and Version

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