bgal-2 Glycoside hydrolase 35 catalytic domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: bgal-2
Official Full Name: Glycoside hydrolase 35 catalytic domain-containing protein
Primary source: WormBase:WBGene00019225
Locus tag: CELE_H22K11.2
See related: AllianceGenome:WB:WBGene00019225
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable beta-galactosidase activity. Predicted to be involved in galactose catabolic process. Predicted to be active in vacuole. Orthologous to human GLB1L (galactosidase beta 1 like). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See bgal-2 in Genome Data Viewer

Location:: chromosome: X

Exon count:: 11

Sequence:: Chromosome: X; NC_003284.9 (6784411..6787305)

Chromosome X - NC_003284.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

H22K11.2 (e-PCR)
- UniSTS:312667

H22K11.3 (e-PCR)
- UniSTS:316893

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables beta-galactosidase activity	IBA Inferred from Biological aspect of Ancestor more info
enables beta-galactosidase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity, acting on glycosyl bonds	IEA Inferred from Electronic Annotation more info
enables hydrolase activity, hydrolyzing O-glycosyl compounds	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info
involved_in galactose catabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in vacuole	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Glycoside hydrolase 35 catalytic domain-containing protein

NP_509140.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003284.9 Reference assembly

Range

6784411..6787305

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_076739.7 → NP_509140.2 Glycoside hydrolase 35 catalytic domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_509140.2

Status: REVIEWED

UniProtKB/TrEMBL

O76632

Conserved Domains (1) summary

pfam01301
Location:34 → 354

Glyco_hydro_35; Glycosyl hydrolases family 35