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    znf-782 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190310, updated on 9-Dec-2024

    Summary

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    Official Symbol
    znf-782
    Official Full Name
    C2H2-type domain-containing protein
    Primary source
    WormBase:WBGene00021931
    Locus tag
    CELE_Y55F3AM.14
    See related
    AllianceGenome:WB:WBGene00021931
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in dorsal nerve cord; head muscle; intestine; and ventral nerve cord. Orthologous to several human genes including ZNF155 (zinc finger protein 155); ZNF235 (zinc finger protein 235); and ZNF568 (zinc finger protein 568). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See znf-782 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    10
    Sequence:
    Chromosome: IV; NC_003282.8 (1058076..1067525, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene FH2 domain-containing protein Neighboring gene Small ribosomal subunit protein mS25 Neighboring gene COP9 signalosome complex subunit 4 Neighboring gene CCT-theta;T-complex protein 1 subunit theta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Praziquantel inhibits Caenorhabditis elegans development and species-wide differences might be cct-8-dependent. Wit J, et al. PLoS One, 2023. PMID 37561720, Free PMC Article
    2. Loss of the insulator protein CTCF during nematode evolution. Heger P, et al. BMC Mol Biol, 2009 Aug 27. PMID 19712444, Free PMC Article
    3. Members of the H3K4 trimethylation complex regulate lifespan in a germline-dependent manner in C. elegans. Greer EL, et al. Nature, 2010 Jul 15. PMID 20555324, Free PMC Article
    4. A 4D single-cell protein atlas of transcription factors delineates spatiotemporal patterning during embryogenesis. Ma X, et al. Nat Methods, 2021 Aug. PMID 34312566
    5. Extensive rewiring and complex evolutionary dynamics in a C. elegans multiparameter transcription factor network. Reece-Hoyes JS, et al. Mol Cell, 2013 Jul 11. PMID 23791784, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein
    NP_500033.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1058076..1067525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_067632.2 → NP_500033.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500033.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N360
      Conserved Domains (4) summary
      COG5048
      Location:187 → 404
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:191 → 211
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:147 → 171
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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