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    • Showing Current items.

    set-4 Histone-lysine N-methyltransferase Suv4-20 [ Caenorhabditis elegans ]

    Gene ID: 174045, updated on 9-Dec-2024

    Summary

    Official Symbol
    set-4
    Official Full Name
    Histone-lysine N-methyltransferase Suv4-20
    Primary source
    WormBase:WBGene00016313
    Locus tag
    CELE_C32D5.5
    See related
    AllianceGenome:WB:WBGene00016313
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable histone H4K20me methyltransferase activity. Involved in determination of adult lifespan. Predicted to be located in chromosome and nucleus. Is expressed in several structures, including germ line; hypodermis; intestine; muscle cell; and neurons. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 51. Orthologous to human KMT5B (lysine methyltransferase 5B) and KMT5C (lysine methyltransferase 5C). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See set-4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (6329838..6331341, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serine/threonine-protein kinase receptor sma-6 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene TeTratriCopeptide repeat domain protein related Neighboring gene DUF2934 domain-containing protein

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables histone H4K20me methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in determination of adult lifespan IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Histone-lysine N-methyltransferase Suv4-20
    NP_495272.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      6329838..6331341 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062871.6NP_495272.1  Histone-lysine N-methyltransferase Suv4-20 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495272.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q09265
      Conserved Domains (1) summary
      smart00317
      Location:129244
      SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain