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    T24H10.4 Transmembrane protein 53 [ Caenorhabditis elegans ]

    Gene ID: 188870, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T24H10.4
    Official Full Name
    Transmembrane protein 53
    Primary source
    WormBase:WBGene00012002
    Locus tag
    CELE_T24H10.4
    See related
    AllianceGenome:WB:WBGene00012002
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in nuclear outer membrane. Human ortholog(s) of this gene implicated in craniotubular dysplasia Ikegawa type. Orthologous to human TMEM53 (transmembrane protein 53). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T24H10.4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003280.10 (9109534..9111240)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Dynein light chain roadblock Neighboring gene J domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nuclear outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein 53
    NP_495945.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      9109534..9111240
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063544.7 → NP_495945.2  Transmembrane protein 53 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495945.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22750
      Conserved Domains (1) summary
      pfam05705
      Location:61 → 306
      DUF829; Eukaryotic protein of unknown function (DUF829)
    Nucleotide Protein
    Heading Accession and Version

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