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    F44F1.4 SKICH domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173190, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F44F1.4
    Official Full Name
    SKICH domain-containing protein
    Primary source
    WormBase:WBGene00009696
    Locus tag
    CELE_F44F1.4
    See related
    AllianceGenome:WB:WBGene00009696
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in autophagy. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F44F1.4 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003279.8 (13263803..13265570, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Ig-like domain-containing protein;PH_RBD domain-containing protein Neighboring gene Very Early Transcript Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in autophagy IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    SKICH domain-containing protein
    NP_493331.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      13263803..13265570 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060930.2 → NP_493331.2  SKICH domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493331.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O02263
      Conserved Domains (1) summary
      pfam13476
      Location:335 → 487
      AAA_23; AAA domain
    Nucleotide Protein
    Heading Accession and Version

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