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    clec-109 C-type lectin domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173183, updated on 28-Oct-2024

    Summary

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    Official Symbol
    clec-109
    Official Full Name
    C-type lectin domain-containing protein
    Primary source
    WormBase:WBGene00008907
    Locus tag
    CELE_F17B5.3
    See related
    AllianceGenome:WB:WBGene00008907
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See clec-109 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (13197128..13198376, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Fuz_longin_1 domain-containing protein Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene L-Fucosyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    General protein information

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    Preferred Names
    C-type lectin domain-containing protein
    NP_001252095.1
    • Confirmed by transcript evidence
    NP_001252096.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      13197128..13198376 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001265167.2 → NP_001252096.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001252096.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45375
      Conserved Domains (1) summary
      smart00034
      Location:71 → 167
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

    2. NM_001265166.4 → NP_001252095.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001252095.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      G3MU52
      Conserved Domains (1) summary
      cd00037
      Location:51 → 202
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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