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    gldi-9 Actin interacting protein 3-like C-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175391, updated on 9-Dec-2024

    Summary

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    Official Symbol
    gldi-9
    Official Full Name
    Actin interacting protein 3-like C-terminal domain-containing protein
    Primary source
    WormBase:WBGene00022180
    Locus tag
    CELE_Y71H2AM.15
    See related
    AllianceGenome:WB:WBGene00022180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in cell junction and striated muscle dense body. Orthologous to human KIAA1217 (KIAA1217) and SRCIN1 (SRC kinase signaling inhibitor 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See gldi-9 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    13
    Sequence:
    Chromosome: III; NC_003281.10 (2747120..2756360, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Ras-related protein Rab-18 Neighboring gene Carboxylesterase type B domain-containing protein Neighboring gene L-Fucosyltransferase Neighboring gene ncRNA Neighboring gene intestinal acid PHOsphatase Neighboring gene ncRNA Neighboring gene HMG box domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UNC-83 coordinates kinesin-1 and dynein activities at the nuclear envelope during nuclear migration. Fridolfsson HN, et al. Dev Biol, 2010 Feb 15. PMID 20005871, Free PMC Article
    2. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
    3. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    4. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    5. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell junction HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in striated muscle dense body HDA PubMed 

    General protein information

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    Preferred Names
    Actin interacting protein 3-like C-terminal domain-containing protein
    NP_001033381.2
    • Confirmed by transcript evidence
    NP_001033382.1
    • Confirmed by transcript evidence
    NP_001408280.1
    • Confirmed by transcript evidence
    NP_001408281.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      2747120..2756360 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001038292.5 → NP_001033381.2  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001033381.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2L0S5
      Conserved Domains (1) summary
      pfam03915
      Location:210 → 284
      AIP3; Actin interacting protein 3

    2. NM_001038293.5 → NP_001033382.1  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001033382.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q3V5J3
      Conserved Domains (1) summary
      pfam03915
      Location:206 → 280
      AIP3; Actin interacting protein 3

    3. NM_001421354.1 → NP_001408280.1  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

    4. NM_001421353.1 → NP_001408281.1  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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