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    CYTB cytochrome b [ Caenorhabditis elegans ]

    Gene ID: 2565702, updated on 18-Sep-2024

    Summary

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    Gene symbol
    CYTB
    Gene description
    cytochrome b
    Locus tag
    KEF34_p07
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Caenorhabditis elegans (strain: N2 Bristol., common: roundworm)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See CYTB in Genome Data Viewer
    Sequence:
    Chromosome: MT; NC_001328.1 (4504..5616)

    Chromosome MT - NC_001328.1Genomic Context describing neighboring genes Neighboring gene tRNA-Gln Neighboring gene tRNA-Phe Neighboring gene tRNA-Leu Neighboring gene cytochrome c oxidase subunit III

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001328.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide correlations that suggest tertiary interactions in the TV-replacement loop-containing mitochondrial tRNAs of the nematodes, Caenorhabditis elegans and Ascaris suum. Wolstenholme DR, et al. Nucleic Acids Res, 1994 Oct 11. PMID 7937159, Free PMC Article
    2. Evidence for the frequent use of TTG as the translation initiation codon of mitochondrial protein genes in the nematodes, Ascaris suum and Caenorhabditis elegans. Okimoto R, et al. Nucleic Acids Res, 1990 Oct 25. PMID 2235493, Free PMC Article
    3. The mitochondrial genomes of two nematodes, Caenorhabditis elegans and Ascaris suum. Okimoto R, et al. Genetics, 1992 Mar. PMID 1551572, Free PMC Article
    4. A conserved heptamer motif for ribosomal RNA transcription termination in animal mitochondria. Valverde JR, et al. Proc Natl Acad Sci U S A, 1994 Jun 7. PMID 7515499, Free PMC Article
    5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    cytochrome b

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001328.1 Reference assembly

      Range
      4504..5616
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_006958.1 cytochrome b (mitochondrion) [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_006958.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P24890
      UniProtKB/TrEMBL
      B1PEX6, G5EDJ2
      Conserved Domains (3) summary
      MTH00086
      Location:9 → 363
      CYTB; cytochrome b; Provisional
      cd00284
      Location:7 → 203
      Cytochrome_b_N; Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, ...
      cl00193
      Location:206 → 347
      cytochrome_b_C; Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P24890.2

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