U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC284933 uncharacterized LOC284933 [ Homo sapiens (human) ]

    Gene ID: 284933, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC284933
    Gene description
    uncharacterized LOC284933
    See related
    Ensembl:ENSG00000281732
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.5) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LOC284933 in Genome Data Viewer
    Location:
    22q13.32
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (48538900..48547387, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (49031374..49039850, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (48934712..48943199, complement)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373081 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48765615-48766210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48772420-48772926 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48772927-48773431 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48792732-48793724 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48810064-48810602 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48810603-48811140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48819797-48820788 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48828944-48829484 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48831787-48832288 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19276 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr22:48841523-48842722 Neighboring gene uncharacterized LOC124905142 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48887443-48887948 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48890918-48891778 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48892641-48893500 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48895067-48895980 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48902339-48903338 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48906445-48907385 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48907386-48908325 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48911142-48911882 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48918523-48919026 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48923229-48923730 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48923731-48924230 Neighboring gene TAFA chemokine like family member 5 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48929759-48930260 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48930261-48930760 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48933150-48933964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48943879-48944378 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:48953988-48954215 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48955380-48956268 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48956269-48957157 Neighboring gene uncharacterized LOC124900480 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48972958-48973464 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49001381-49002302 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49024390-49025219 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49025220-49026048 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49026049-49026878 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49030484-49031058 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49031059-49031631 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49036799-49037318 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:49043107-49043284 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49062165-49062666 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49062667-49063166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49064778-49065430 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63485 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63487 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49096987-49097494 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49097495-49098002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49107619-49108118 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49113659-49114248 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49114249-49114838 Neighboring gene microRNA 4535

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038917.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AW663221, BC036359, Z84468
      Related
      ENST00000626321.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      48538900..48547387 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      49031374..49039850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)