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    Prm3 protamine 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 442921, updated on 27-Nov-2024

    Summary

    Symbol
    Prm3provided by RGD
    Full Name
    protamine 3provided by RGD
    Primary source
    RGD:1587265
    See related
    AllianceGenome:RGD:1587265
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable DNA binding activity. Predicted to be involved in flagellated sperm motility. Predicted to be located in nucleus. Predicted to be part of nucleosome. Predicted to be active in cytoplasm. Orthologous to human PRM3 (protamine 3). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See Prm3 in Genome Data Viewer
    Location:
    10q11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (5384394..5384908)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (4877471..4877985)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (4951557..4952071)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene protamine 1 Neighboring gene protamine 2 Neighboring gene uncharacterized LOC120095020 Neighboring gene transition protein 2 Neighboring gene uncharacterized LOC134480746 Neighboring gene suppressor of cytokine signaling 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in flagellated sperm motility IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within flagellated sperm motility ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protamine-3
    Names
    sperm protamine P3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002855.2NP_001002855.1  protamine-3

      See identical proteins and their annotated locations for NP_001002855.1

      Status: PROVISIONAL

      Source sequence(s)
      S79939
      UniProtKB/Swiss-Prot
      Q64256
      UniProtKB/TrEMBL
      A6K4I7

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      5384394..5384908
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)