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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001286556.2 → NP_001273485.1 protein eva-1 homolog C isoform 2 precursor
See identical proteins and their annotated locations for NP_001273485.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate, in-frame donor splice site in the 3' coding region compared to variant 1. The resulting shorter isoform (2) lacks a 3 aa segment compared to isoform 1.
- Source sequence(s)
-
AY358787, BC038710, BU175692
- Consensus CDS
-
CCDS68186.1
- UniProtKB/TrEMBL
-
B5MC74
- Related
- ENSP00000372146.3, ENST00000382699.7
- Conserved Domains (2) summary
-
- pfam02140
Location:75 → 158
- Gal_Lectin; Galactose binding lectin domain
- pfam14851
Location:298 → 438
- FAM176; FAM176 family
-
NM_001320744.2 → NP_001307673.1 protein eva-1 homolog C isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks two alternate, in-frame exons in the 5' coding region compared to variant 1. It encodes isoform 3, which is shorter than isoform 1.
- Source sequence(s)
-
AP000269, AP000270, AP000271, AP000272
- Conserved Domains (2) summary
-
- pfam02140
Location:69 → 152
- Gal_Lectin; Galactose binding lectin domain
- pfam14851
Location:194 → 334
- FAM176; FAM176 family
-
NM_001320745.2 → NP_001307674.1 protein eva-1 homolog C isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) has an alternate 5' -terminal exon, which results in a different 5' UTR and use of a downstream start AUG compared to variant 1. It encodes isoform 4, which has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AP000269, AW957938, BM836911, CA412371
- UniProtKB/TrEMBL
-
B3KWG0
- Conserved Domains (2) summary
-
- pfam02140
Location:81 → 164
- Gal_Lectin; Galactose binding lectin domain
- pfam14851
Location:206 → 346
- FAM176; FAM176 family
-
NM_058187.5 → NP_478067.2 protein eva-1 homolog C isoform 1 precursor
See identical proteins and their annotated locations for NP_478067.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the predominant transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AY358787, BC038710, BU175692
- Consensus CDS
-
CCDS13614.1
- UniProtKB/Swiss-Prot
- A6ND58, P58658, Q8IXZ0
- UniProtKB/TrEMBL
-
B5MC74
- Related
- ENSP00000300255.2, ENST00000300255.7
- Conserved Domains (2) summary
-
- pfam02140
Location:75 → 158
- Gal_Lectin; Galactose binding lectin domain
- pfam14851
Location:301 → 441
- FAM176; FAM176 family
RNA
-
NR_104472.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an exon in the 5' region compared to variant 1. It is represented as non-coding because the use of the 5'-most translational start codon, as used in variant 1, renders this transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AY040087, AY358787, BC038710, BU175692
- Related
-
ENST00000437338.5
-
NR_135467.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate splice site at an internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AP000269, AP000272, BM836911, BX342316, CA412371