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    ArRABA1h RAB GTPase homolog A1H [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817957, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ArRABA1h
    Official Full Name
    RAB GTPase homolog A1H
    Primary source
    TAIR:AT2G33870
    Locus tag
    AT2G33870
    See related
    Araport:AT2G33870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    RAB GTPase homolog A1H; T1B8.16; T1B8_16
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    Genomic context

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    See ArRABA1h in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (14337198..14338385, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein Neighboring gene ncRNA Neighboring gene homeobox-3 Neighboring gene tRNA-Pro Neighboring gene nudix hydrolase homolog 22

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RAB GTPase homolog A1H
    NP_180943.4
    • RAB GTPase homolog A1H (ArRABA1h); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1I (TAIR:AT1G28550.1); Has 27076 Blast hits to 27025 proteins in 750 species: Archae - 25; Bacteria - 157; Metazoa - 14072; Fungi - 4066; Plants - 2934; Viruses - 20; Other Eukaryotes - 5802 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14337198..14338385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128947.5 → NP_180943.4  RAB GTPase homolog A1H [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180943.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P93020, Q1PEX3
      UniProtKB/TrEMBL
      A0A178W1D1, A0A5S9X3N9, A0A7G2EG69
      Conserved Domains (1) summary
      cd01868
      Location:11 → 175
      Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1PEX3.1

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