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    Transmembrane proteins 14C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818437, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Transmembrane proteins 14C
    Primary source
    TAIR:AT2G38550
    Locus tag
    AT2G38550
    See related
    Araport:AT2G38550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6A23.25; T6A23_25
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (16131730..16134429)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene lipid transfer protein 2 Neighboring gene lipid transfer protein 1 Neighboring gene transcript elongation factor IIS Neighboring gene uncharacterized protein Neighboring gene Mitochondrial ATP synthase D chain-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. FAX2 Mediates Fatty Acid Export from Plastids in Developing Arabidopsis Seeds. Tian Y, et al. Plant Cell Physiol, 2019 Oct 1. PMID 31198959
    2. Two Plastid Fatty Acid Exporters Contribute to Seed Oil Accumulation in Arabidopsis. Li N, et al. Plant Physiol, 2020 Apr. PMID 32019874, Free PMC Article
    3. Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Ferro M, et al. Mol Cell Proteomics, 2003 May. PMID 12766230
    4. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
    5. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_129412.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within fatty acid transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of triglyceride transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of triglyceride transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of fatty acid metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast inner membrane HDA PubMed 
    located_in chloroplast membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Transmembrane proteins 14C
    NP_565892.1
    • Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G57280.1); Has 138 Blast hits to 137 proteins in 31 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 5; Plants - 115; Viruses - 7; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16131730..16134429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129412.4 → NP_565892.1  Transmembrane proteins 14C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565892.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LCL4, Q94CA2, Q9ZVH7
      UniProtKB/TrEMBL
      A0A178VTJ1, A0A5S9X556
      Conserved Domains (1) summary
      pfam03647
      Location:206 → 302
      Tmemb_14; Transmembrane proteins 14C
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZVH7.2

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