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    Mitochondrial ATP synthase D chain-related protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818440, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mitochondrial ATP synthase D chain-related protein
    Primary source
    TAIR:AT2G38580
    Locus tag
    AT2G38580
    See related
    Araport:AT2G38580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6A23.22; T6A23_22
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    16
    Sequence:
    Chromosome: 2; NC_003071.7 (16138570..16142657)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Transmembrane proteins 14C Neighboring gene transcript elongation factor IIS Neighboring gene uncharacterized protein Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ncRNA Neighboring gene HAD superfamily, subfamily IIIB acid phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001336707.1
    NM_001336708.1
    NM_129415.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Mitochondrial ATP synthase D chain-related protein
    NP_181392.2
    • Mitochondrial ATP synthase D chain-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 74576 Blast hits to 44417 proteins in 2485 species: Archae - 658; Bacteria - 11770; Metazoa - 34102; Fungi - 5844; Plants - 3204; Viruses - 216; Other Eukaryotes - 18782 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      16138570..16142657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129415.4 → NP_181392.2  Mitochondrial ATP synthase D chain-related protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181392.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTP0, Q682E1
      Conserved Domains (1) summary
      cl02219
      Location:250 → 316
      Bap31; B-cell receptor-associated protein 31-like

    2. NM_001336707.1 → NP_001325308.1  Mitochondrial ATP synthase D chain-related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2R9

    3. NM_001336708.1 → NP_001325307.1  Mitochondrial ATP synthase D chain-related protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VTP0, A0A1P8B2V6
    Nucleotide Protein
    Heading Accession and Version

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