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    ribosome biogenesis regulatory protein (RRS1) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818377, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ribosome biogenesis regulatory protein (RRS1) family protein
    Primary source
    TAIR:AT2G37990
    Locus tag
    AT2G37990
    See related
    Araport:AT2G37990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8P21.10; T8P21_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    8
    Sequence:
    Chromosome: 2; NC_003071.7 (15900635..15903218)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Yos1-like protein Neighboring gene O-fucosyltransferase family protein Neighboring gene chaperone protein dnaJ-like protein Neighboring gene Neutral/alkaline non-lysosomal ceramidase Neighboring gene vacuoleless1 (VCL1) Neighboring gene Cysteine proteinases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Pendle AF, et al. Mol Biol Cell, 2005 Jan. PMID 15496452, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129356.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleolus HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ribosome biogenesis regulatory protein (RRS1) family protein
    NP_565878.1
    • ribosome biogenesis regulatory protein (RRS1) family protein; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal biogenesis regulatory protein (InterPro:IPR007023); Has 425 Blast hits to 423 proteins in 207 species: Archae - 1; Bacteria - 2; Metazoa - 151; Fungi - 137; Plants - 58; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15900635..15903218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129356.3 → NP_565878.1  ribosome biogenesis regulatory protein (RRS1) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565878.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56WN3, Q8LA50, Q9SH88
      UniProtKB/TrEMBL
      A0A5S9X4Y7, A0A654F179, A0A7G2EF67, Q0WWN4
      Conserved Domains (1) summary
      pfam04939
      Location:11 → 173
      RRS1; Ribosome biogenesis regulatory protein (RRS1)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SH88.2

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